Human SNP ID | rs2455012 |
---|---|
Human chromosome | chr1 |
Human SNP position | 66055315 |
Pig chromosome | chr6 |
Pig SNP position | 135095594 |
PubMed ID | 24847357 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24847357 |
Study | Genome wide association study of SNP-, gene-, and pathway-based approaches to identify genes influencing susceptibility to Staphylococcus aureus infections. |
Disease/Trait | Staphylococcus aureus infection |
Initial sample | 309 European ancestry cases, 2,925 European ancestry controls |
Replication sample | NA |
Region | 1p31.3 |
Chromosome id | chr1 |
Chromosome position | 66055315 |
Reported gene | PDE4B |
Mapped gene | PDE4B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5142 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2455012-T |
SNPs | rs2455012 |
Merged | 0 |
SNP id current | 2455012 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.04519 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 2.17 |
%95 Ci | [1.59-2.93] |
Platform | Illumina [508921] |
CNV | N |
Mapped trait | Staphylococcus aureus infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005681 |
Study accession | GCST002440 |