SNP Detail For rs2455012
1.Mapping Information
Human SNP ID rs2455012
Human chromosome chr1
Human SNP position 66055315
Pig chromosome chr6
Pig SNP position 135095594
2.Annotation Information
PubMed ID24847357
JournalFront Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24847357
StudyGenome wide association study of SNP-, gene-, and pathway-based approaches to identify genes influencing susceptibility to Staphylococcus aureus infections.
Disease/TraitStaphylococcus aureus infection
Initial sample309 European ancestry cases, 2,925 European ancestry controls
Replication sampleNA
Region1p31.3
Chromosome idchr1
Chromosome position66055315
Reported genePDE4B
Mapped genePDE4B
Upstream gene id
Downstream gene id
SNP gene ids5142
Upstream gene distance
Downstream gene distance
SNP risk allelers2455012-T
SNPsrs2455012
Merged0
SNP id current2455012
Contextintron_variant
Intergenic0
Allele frequency0.04519
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta2.17
%95 Ci[1.59-2.93]
PlatformIllumina [508921]
CNVN
Mapped traitStaphylococcus aureus infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005681
Study accessionGCST002440