SNP Detail For rs2445284
1.Mapping Information
Human SNP ID rs2445284
Human chromosome chr11
Human SNP position 5008473
Pig chromosome chr9
Pig SNP position 5811243
2.Annotation Information
PubMed ID23406172
JournalBr J Haematol
Linkwww.ncbi.nlm.nih.gov/pubmed/23406172
StudyGenetic determinants of haemolysis in sickle cell anaemia.
Disease/TraitSickle cell anemia (haemolysis)
Initial sample1,117 individuals
Replication sample213 African ancestry, West African ancestry and Afro-Caribbean individuals, 745 individuals
Region11p15.4
Chromosome idchr11
Chromosome position5008473
Reported geneOR51L1
Mapped geneOR51L1 - OR52J3
Upstream gene id119682
Downstream gene id119679
SNP gene ids
Upstream gene distance8543
Downstream gene distance38053
SNP risk allelers2445284-G
SNPsrs2445284
Merged0
SNP id current2445284
Contextintergenic_variant
Intergenic1
Allele frequency0.05
P value1E-29
Pvalue mlog29
P value text
Or beta0.82
%95 Ci[0.68-0.96] unit decrease
PlatformIllumina [569554]
CNVN
Mapped traitSickle cell anemia
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_232
Study accessionGCST001862