Human SNP ID | rs2439302 |
---|---|
Human chromosome | chr8 |
Human SNP position | 32574851 |
Pig chromosome | chr15 |
Pig SNP position | 60169110 |
PubMed ID | 22267200 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22267200 |
Study | Discovery of common variants associated with low TSH levels and thyroid cancer risk. |
Disease/Trait | Thyroid cancer |
Initial sample | 27,758 European ancestry individuals |
Replication sample | 1,156 European ancestry cases, up to 42,617 European ancestry controls |
Region | 8p12 |
Chromosome id | chr8 |
Chromosome position | 32574851 |
Reported gene | NRG1 |
Mapped gene | NRG1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3084 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2439302-G |
SNPs | rs2439302 |
Merged | 0 |
SNP id current | 2439302 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.351 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 1.36 |
%95 Ci | [1.23-1.50] |
Platform | Illumina [~ 16000000] (imputed) |
CNV | N |
Mapped trait | thyroid carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002892 |
Study accession | GCST001382 |