SNP Detail For rs2439302
1.Mapping Information
Human SNP ID rs2439302
Human chromosome chr8
Human SNP position 32574851
Pig chromosome chr15
Pig SNP position 60169110
2.Annotation Information
PubMed ID22267200
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22267200
StudyDiscovery of common variants associated with low TSH levels and thyroid cancer risk.
Disease/TraitThyroid cancer
Initial sample27,758 European ancestry individuals
Replication sample1,156 European ancestry cases, up to 42,617 European ancestry controls
Region8p12
Chromosome idchr8
Chromosome position32574851
Reported geneNRG1
Mapped geneNRG1
Upstream gene id
Downstream gene id
SNP gene ids3084
Upstream gene distance
Downstream gene distance
SNP risk allelers2439302-G
SNPsrs2439302
Merged0
SNP id current2439302
Contextintron_variant
Intergenic0
Allele frequency0.351
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta1.36
%95 Ci[1.23-1.50]
PlatformIllumina [~ 16000000] (imputed)
CNVN
Mapped traitthyroid carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002892
Study accessionGCST001382