Human SNP ID | rs2433610 |
---|---|
Human chromosome | chr15 |
Human SNP position | 45393893 |
Pig chromosome | chr1 |
Pig SNP position | 140880701 |
PubMed ID | 24625756 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24625756 |
Study | Genetic determinants influencing human serum metabolome among African Americans. |
Disease/Trait | Serum metabolite levels |
Initial sample | 1,260 African American individuals |
Replication sample | NA |
Region | 15q21.1 |
Chromosome id | chr15 |
Chromosome position | 45393893 |
Reported gene | GATM |
Mapped gene | GATM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2628 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2433610-T |
SNPs | rs2433610 |
Merged | 0 |
SNP id current | 2433610 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.49 |
P value | 0.000000000009 |
Pvalue mlog | 11.0457574905606 |
P value text | (Creatine) |
Or beta | 0.09 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix [2341704] (imputed) |
CNV | N |
Mapped trait | serum metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005653 |
Study accession | GCST002388 |