Human SNP ID | rs2431623 |
---|---|
Human chromosome | chr10 |
Human SNP position | 12830881 |
Pig chromosome | chr10 |
Pig SNP position | 64911472 |
PubMed ID | 24159190 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/24159190 |
Study | Genome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality. |
Disease/Trait | Asymmetrical dimethylarginine levels |
Initial sample | 5110 European ancestry individuals |
Replication sample | NA |
Region | 10p13 |
Chromosome id | chr10 |
Chromosome position | 12830881 |
Reported gene | intergenic |
Mapped gene | CAMK1D |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57118 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2431623-G |
SNPs | rs2431623 |
Merged | 0 |
SNP id current | 2431623 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.369 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.091 |
%95 Ci | [0.05-0.132] unit increase |
Platform | Affymetrix, Illumina [10085758] (imputed) |
CNV | N |
Mapped trait | asymmetrical dimethylarginine measurement, serum dimethylarginine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006522, http://www.ebi.ac.uk/efo/EFO_0005418 |
Study accession | GCST002241 |