SNP Detail For rs2431623
1.Mapping Information
Human SNP ID rs2431623
Human chromosome chr10
Human SNP position 12830881
Pig chromosome chr10
Pig SNP position 64911472
2.Annotation Information
PubMed ID24159190
JournalEur Heart J
Linkwww.ncbi.nlm.nih.gov/pubmed/24159190
StudyGenome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality.
Disease/TraitAsymmetrical dimethylarginine levels
Initial sample5110 European ancestry individuals
Replication sampleNA
Region10p13
Chromosome idchr10
Chromosome position12830881
Reported geneintergenic
Mapped geneCAMK1D
Upstream gene id
Downstream gene id
SNP gene ids57118
Upstream gene distance
Downstream gene distance
SNP risk allelers2431623-G
SNPsrs2431623
Merged0
SNP id current2431623
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.369
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.091
%95 Ci[0.05-0.132] unit increase
PlatformAffymetrix, Illumina [10085758] (imputed)
CNVN
Mapped traitasymmetrical dimethylarginine measurement, serum dimethylarginine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006522, http://www.ebi.ac.uk/efo/EFO_0005418
Study accessionGCST002241