SNP Detail For rs2430212
1.Mapping Information
Human SNP ID rs2430212
Human chromosome chrX
Human SNP position 117954093
Pig chromosome chrX
Pig SNP position 114963594
2.Annotation Information
PubMed ID19084217
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19084217
StudyVariants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
Disease/TraitIron status biomarkers
Initial sample459 European ancestry twin pairs
Replication sampleNA
RegionXq24
Chromosome idchrX
Chromosome position117954093
Reported geneKLHL13
Mapped geneKLHL13
Upstream gene id
Downstream gene id
SNP gene ids90293
Upstream gene distance
Downstream gene distance
SNP risk allelers2430212-?
SNPsrs2430212
Merged0
SNP id current2430212
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(serum transferrin)
Or beta
%95 Ci
PlatformIllumina [315887]
CNVN
Mapped traitiron biomarker measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004461
Study accessionGCST000301