Human SNP ID | rs243021 |
---|---|
Human chromosome | chr2 |
Human SNP position | 60357684 |
Pig chromosome | chr3 |
Pig SNP position | 85471824 |
PubMed ID | 20581827 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20581827 |
Study | Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. |
Disease/Trait | Type 2 diabetes |
Initial sample | 8,130 European ancestry cases, 38,987 European ancestry controls |
Replication sample | Up to 34,412 European ancestry cases, 59,925 European ancestry controls |
Region | 2p16.1 |
Chromosome id | chr2 |
Chromosome position | 60357684 |
Reported gene | BCL11A |
Mapped gene | LOC105374756 - MIR4432 |
Upstream gene id | 105374756 |
Downstream gene id | 100616473 |
SNP gene ids | |
Upstream gene distance | 4611 |
Downstream gene distance | 29678 |
SNP risk allele | rs243021-A |
SNPs | rs243021 |
Merged | 0 |
SNP id current | 243021 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000000000000003 |
Pvalue mlog | 14.5228787452803 |
P value text | |
Or beta | 1.08 |
%95 Ci | [1.06-1.10] |
Platform | Affymetrix, Illumina [2426886] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST000712 |