SNP Detail For rs243021
1.Mapping Information
Human SNP ID rs243021
Human chromosome chr2
Human SNP position 60357684
Pig chromosome chr3
Pig SNP position 85471824
2.Annotation Information
PubMed ID20581827
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20581827
StudyTwelve type 2 diabetes susceptibility loci identified through large-scale association analysis.
Disease/TraitType 2 diabetes
Initial sample8,130 European ancestry cases, 38,987 European ancestry controls
Replication sampleUp to 34,412 European ancestry cases, 59,925 European ancestry controls
Region2p16.1
Chromosome idchr2
Chromosome position60357684
Reported geneBCL11A
Mapped geneLOC105374756 - MIR4432
Upstream gene id105374756
Downstream gene id100616473
SNP gene ids
Upstream gene distance4611
Downstream gene distance29678
SNP risk allelers243021-A
SNPsrs243021
Merged0
SNP id current243021
Contextupstream_gene_variant
Intergenic1
Allele frequency
P value0.000000000000003
Pvalue mlog14.5228787452803
P value text
Or beta1.08
%95 Ci[1.06-1.10]
PlatformAffymetrix, Illumina [2426886] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST000712