SNP Detail For rs2424635
1.Mapping Information
Human SNP ID rs2424635
Human chromosome chr20
Human SNP position 24736449
Pig chromosome chrX
Pig SNP position 142819253
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region20p11.21
Chromosome idchr20
Chromosome position24736449
Reported geneNR
Mapped geneSYNDIG1 - LOC105372578
Upstream gene id79953
Downstream gene id105372578
SNP gene ids
Upstream gene distance69832
Downstream gene distance192768
SNP risk allelers2424635-?
SNPsrs2424635
Merged0
SNP id current2424635
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.2261
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821