Human SNP ID | rs2424635 |
---|---|
Human chromosome | chr20 |
Human SNP position | 24736449 |
Pig chromosome | chrX |
Pig SNP position | 142819253 |
PubMed ID | 20889312 |
---|---|
Journal | Schizophr Res |
Link | www.ncbi.nlm.nih.gov/pubmed/20889312 |
Study | A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. |
Disease/Trait | Bipolar disorder and schizophrenia |
Initial sample | 651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls |
Replication sample | NA |
Region | 20p11.21 |
Chromosome id | chr20 |
Chromosome position | 24736449 |
Reported gene | NR |
Mapped gene | SYNDIG1 - LOC105372578 |
Upstream gene id | 79953 |
Downstream gene id | 105372578 |
SNP gene ids | |
Upstream gene distance | 69832 |
Downstream gene distance | 192768 |
SNP risk allele | rs2424635-? |
SNPs | rs2424635 |
Merged | 0 |
SNP id current | 2424635 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 1.2261 |
%95 Ci | [NR] |
Platform | Affymetrix [722112] |
CNV | N |
Mapped trait | mental or behavioural disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000677 |
Study accession | GCST000821 |