Human SNP ID | rs2424460 |
---|---|
Human chromosome | chr20 |
Human SNP position | 22760259 |
Pig chromosome | chr17 |
Pig SNP position | 34154080 |
PubMed ID | 24665060 |
---|---|
Journal | J Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24665060 |
Study | Genome-wide association study of smoking behaviours among Bangladeshi adults. |
Disease/Trait | Age of smoking initiation |
Initial sample | 1,837 Bangladeshi ancestry males, 198 Bangladeshi ancestry females |
Replication sample | NA |
Region | 20p11.21 |
Chromosome id | chr20 |
Chromosome position | 22760259 |
Reported gene | NR |
Mapped gene | LOC105377060 - LOC105372567 |
Upstream gene id | 105377060 |
Downstream gene id | 105372567 |
SNP gene ids | |
Upstream gene distance | 13286 |
Downstream gene distance | 12554 |
SNP risk allele | rs2424460-? |
SNPs | rs2424460 |
Merged | 0 |
SNP id current | 2424460 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [1211988] (imputed) |
CNV | N |
Mapped trait | age at onset, smoking initiation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004847, http://www.ebi.ac.uk/efo/EFO_0005670 |
Study accession | GCST002394 |