SNP Detail For rs2424234
1.Mapping Information
Human SNP ID rs2424234
Human chromosome chr20
Human SNP position 19383335
Pig chromosome chr17
Pig SNP position 31019278
2.Annotation Information
PubMed ID22424883
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/22424883
StudyGenome-wide association study of lung function decline in adults with and without asthma.
Disease/TraitPulmonary function decline
Initial sample1,441 European ancestry asthma cases, 2,677 European ancestry controls
Replication sample1,160 European ancestry asthma cases, 10,858 European ancestry controls
Region20p11.23
Chromosome idchr20
Chromosome position19383335
Reported geneSLC24A3
Mapped geneSLC24A3
Upstream gene id
Downstream gene id
SNP gene ids57419
Upstream gene distance
Downstream gene distance
SNP risk allelers2424234-?
SNPsrs2424234
Merged0
SNP id current2424234
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text(FEV1/FVC decline in non-asthmatics)
Or beta0.2113
%95 Ci[0.12-0.3] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitFEV/FEC ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST001444