Human SNP ID | rs2420915 |
---|---|
Human chromosome | chr10 |
Human SNP position | 121080764 |
Pig chromosome | chr14 |
Pig SNP position | 142412414 |
PubMed ID | 26561523 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26561523 |
Study | A meta-analysis of 120,246 individuals identifies 18 new loci for fibrinogen concentration. |
Disease/Trait | Fibrinogen levels |
Initial sample | 120,246 European ancestry individuals |
Replication sample | NA |
Region | 10q26.12 |
Chromosome id | chr10 |
Chromosome position | 121080764 |
Reported gene | MIR5694 |
Mapped gene | LOC105378521 - LOC105378522 |
Upstream gene id | 105378521 |
Downstream gene id | 105378522 |
SNP gene ids | |
Upstream gene distance | 3299 |
Downstream gene distance | 48704 |
SNP risk allele | rs2420915-A |
SNPs | rs2420915 |
Merged | 0 |
SNP id current | 2420915 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.09 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | 0.0094 |
%95 Ci | NR unit decrease |
Platform | Affymetrix, Illumina [~ 10700000] (imputed) |
CNV | N |
Mapped trait | fibrinogen measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004623 |
Study accession | GCST003194 |