SNP Detail For rs2420915
1.Mapping Information
Human SNP ID rs2420915
Human chromosome chr10
Human SNP position 121080764
Pig chromosome chr14
Pig SNP position 142412414
2.Annotation Information
PubMed ID26561523
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26561523
StudyA meta-analysis of 120,246 individuals identifies 18 new loci for fibrinogen concentration.
Disease/TraitFibrinogen levels
Initial sample120,246 European ancestry individuals
Replication sampleNA
Region10q26.12
Chromosome idchr10
Chromosome position121080764
Reported geneMIR5694
Mapped geneLOC105378521 - LOC105378522
Upstream gene id105378521
Downstream gene id105378522
SNP gene ids
Upstream gene distance3299
Downstream gene distance48704
SNP risk allelers2420915-A
SNPsrs2420915
Merged0
SNP id current2420915
Contextregulatory_region_variant
Intergenic1
Allele frequency0.09
P value0.000000005
Pvalue mlog8.30102999566398
P value text
Or beta0.0094
%95 CiNR unit decrease
PlatformAffymetrix, Illumina [~ 10700000] (imputed)
CNVN
Mapped traitfibrinogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004623
Study accessionGCST003194