SNP Detail For rs2416257
1.Mapping Information
Human SNP ID rs2416257
Human chromosome chr5
Human SNP position 111099792
Pig chromosome chr2
Pig SNP position 120395383
2.Annotation Information
PubMed ID19198610
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19198610
StudySequence variants affecting eosinophil numbers associate with asthma and myocardial infarction.
Disease/TraitEosinophil counts
Initial sample9,392 European ancestry individuals
Replication sample12,118 European ancestry individuals, 5,212 East Asian ancestry individuals
Region5q22.1
Chromosome idchr5
Chromosome position111099792
Reported geneTSLP, WDR36
Mapped geneWDR36
Upstream gene id
Downstream gene id
SNP gene ids134430
Upstream gene distance
Downstream gene distance
SNP risk allelers2416257-G
SNPsrs2416257
Merged0
SNP id current2416257
Contextintron_variant
Intergenic0
Allele frequency0.85
P value0.000001
Pvalue mlog6
P value text(EA)
Or beta6.1
%95 Ci[3.7-8.6] % standard unit increase
PlatformIllumina [312179]
CNVN
Mapped traiteosinophil count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004842
Study accessionGCST000339