Human SNP ID | rs2416257 |
---|---|
Human chromosome | chr5 |
Human SNP position | 111099792 |
Pig chromosome | chr2 |
Pig SNP position | 120395383 |
PubMed ID | 19198610 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19198610 |
Study | Sequence variants affecting eosinophil numbers associate with asthma and myocardial infarction. |
Disease/Trait | Eosinophil counts |
Initial sample | 9,392 European ancestry individuals |
Replication sample | 12,118 European ancestry individuals, 5,212 East Asian ancestry individuals |
Region | 5q22.1 |
Chromosome id | chr5 |
Chromosome position | 111099792 |
Reported gene | TSLP, WDR36 |
Mapped gene | WDR36 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 134430 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2416257-G |
SNPs | rs2416257 |
Merged | 0 |
SNP id current | 2416257 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.85 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (EA) |
Or beta | 6.1 |
%95 Ci | [3.7-8.6] % standard unit increase |
Platform | Illumina [312179] |
CNV | N |
Mapped trait | eosinophil count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004842 |
Study accession | GCST000339 |