SNP Detail For rs241428
1.Mapping Information
Human SNP ID rs241428
Human chromosome chr6
Human SNP position 32836293
Pig chromosome chr7
Pig SNP position 29420293
2.Annotation Information
PubMed ID23028341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23028341
StudyGenome-wide association study for serum complement C3 and C4 levels in healthy Chinese subjects.
Disease/TraitComplement C3 and C4 levels
Initial sample1,999 Han Chinese ancestry male individuals
Replication sample1,496 Han Chinese ancestry male individuals
Region6p21.32
Chromosome idchr6
Chromosome position32836293
Reported geneHLA-DQB
Mapped geneTAP2
Upstream gene id
Downstream gene id
SNP gene ids6891
Upstream gene distance
Downstream gene distance
SNP risk allelers241428-G
SNPsrs241428
Merged0
SNP id current241428
Contextintron_variant
Intergenic0
Allele frequency0.08
P value9E-83
Pvalue mlog82.0457574905606
P value text(Serum level of C4)
Or beta0.23
%95 Ci[0.21-0.25] g/L increase
PlatformIllumina [1940245] (imputed)
CNVN
Mapped traitcomplement C4 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004984
Study accessionGCST001679