Human SNP ID | rs241428 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32836293 |
Pig chromosome | chr7 |
Pig SNP position | 29420293 |
PubMed ID | 23028341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23028341 |
Study | Genome-wide association study for serum complement C3 and C4 levels in healthy Chinese subjects. |
Disease/Trait | Complement C3 and C4 levels |
Initial sample | 1,999 Han Chinese ancestry male individuals |
Replication sample | 1,496 Han Chinese ancestry male individuals |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32836293 |
Reported gene | HLA-DQB |
Mapped gene | TAP2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6891 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs241428-G |
SNPs | rs241428 |
Merged | 0 |
SNP id current | 241428 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.08 |
P value | 9E-83 |
Pvalue mlog | 82.0457574905606 |
P value text | (Serum level of C4) |
Or beta | 0.23 |
%95 Ci | [0.21-0.25] g/L increase |
Platform | Illumina [1940245] (imputed) |
CNV | N |
Mapped trait | complement C4 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004984 |
Study accession | GCST001679 |