SNP Detail For rs2413143
1.Mapping Information
Human SNP ID rs2413143
Human chromosome chr22
Human SNP position 32660873
Pig chromosome chr5
Pig SNP position 12166512
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region22q12.3
Chromosome idchr22
Chromosome position32660873
Reported geneSYN3
Mapped geneSYN3, LOC105373002
Upstream gene id
Downstream gene id
SNP gene ids8224, 105373002
Upstream gene distance
Downstream gene distance
SNP risk allelers2413143-T
SNPsrs2413143
Merged0
SNP id current2413143
Contextintron_variant
Intergenic0
Allele frequency0.159
P value0.00000000000000002
Pvalue mlog16.698970004336
P value text
Or beta0.034
%95 Ci[0.026-0.042] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647