SNP Detail For rs241215
1.Mapping Information
Human SNP ID rs241215
Human chromosome chr1
Human SNP position 4544044
Pig chromosome chr6
Pig SNP position 60581273
2.Annotation Information
PubMed ID26394188
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26394188
StudyGenome-wide association study identifies new susceptibility loci for adolescent idiopathic scoliosis in Chinese girls.
Disease/TraitAdolescent idiopathic scoliosis
Initial sample960 Han Chinese ancestry cases, 1,499 Han Chinese ancestry controls
Replication sample3,316 Han Chinese ancestry cases, 4,516 Han Chinese ancestry controls
Region1p36.32
Chromosome idchr1
Chromosome position4544044
Reported geneAJAP1
Mapped geneLOC105376674 - LOC105376679
Upstream gene id105376674
Downstream gene id105376679
SNP gene ids
Upstream gene distance100361
Downstream gene distance27470
SNP risk allelers241215-?
SNPsrs241215
Merged
SNP id current241215
Contextintergenic_variant
Intergenic1
Allele frequency0.675
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta1.2
%95 Ci[1.12-1.28]
PlatformAffymetrix [516220]
CNVN
Mapped traitadolescent idiopathic scoliosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005423
Study accessionGCST003128