SNP Detail For rs2401171
1.Mapping Information
Human SNP ID rs2401171
Human chromosome chr15
Human SNP position 83888924
Pig chromosome chr7
Pig SNP position 56645640
2.Annotation Information
PubMed ID25429064
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25429064
StudyMeta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci.
Disease/TraitHeight
Initial sample36,227 East Asian ancestry individuals
Replication sample57,699 East Asian ancestry individuals
Region15q25.2
Chromosome idchr15
Chromosome position83888924
Reported geneADAMTSL3
Mapped geneADAMTSL3
Upstream gene id
Downstream gene id
SNP gene ids57188
Upstream gene distance
Downstream gene distance
SNP risk allelers2401171-T
SNPsrs2401171
Merged0
SNP id current2401171
Contextintron_variant
Intergenic0
Allele frequency0.26
P value4E-21
Pvalue mlog20.397940008672
P value text
Or beta0.052
%95 Ci[0.038-0.066] unit decrease
PlatformAffymetrix, Illumina [2704730] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002702