Human SNP ID | rs2398162 |
---|---|
Human chromosome | chr15 |
Human SNP position | 96287321 |
Pig chromosome | chr7 |
Pig SNP position | 89013226 |
PubMed ID | 17554300 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/17554300 |
Study | Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. |
Disease/Trait | Hypertension |
Initial sample | 1,952 European ancestry cases, 2,938 European ancestry controls |
Replication sample | NA |
Region | 15q26.2 |
Chromosome id | chr15 |
Chromosome position | 96287321 |
Reported gene | intergenic |
Mapped gene | NR2F2-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 644192 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2398162-A |
SNPs | rs2398162 |
Merged | 0 |
SNP id current | 2398162 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.74 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.31 |
%95 Ci | [1.03-1.67] |
Platform | Affymetrix [469557] |
CNV | N |
Mapped trait | hypertension |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000537 |
Study accession | GCST000041 |