SNP Detail For rs2396261
1.Mapping Information
Human SNP ID rs2396261
Human chromosome chr2
Human SNP position 225680814
Pig chromosome chr15
Pig SNP position 140823672
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (linoleic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region2q36.3
Chromosome idchr2
Chromosome position225680814
Reported geneNR
Mapped geneNYAP2, LOC105373914
Upstream gene id
Downstream gene id
SNP gene ids57624, 105373914
Upstream gene distance
Downstream gene distance
SNP risk allelers2396261-T
SNPsrs2396261
Merged
SNP id current2396261
Contextintergenic_variant
Intergenic0
Allele frequency0.7948
P value0.000001
Pvalue mlog6
P value text
Or beta0.0321
%95 Ci[0.019-0.045] unit decrease
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped traitlinoleic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006807
Study accessionGCST003239