SNP Detail For rs2392510
1.Mapping Information
Human SNP ID rs2392510
Human chromosome chr7
Human SNP position 37706967
Pig chromosome chr18
Pig SNP position 40291003
2.Annotation Information
PubMed ID25672891
JournalJ Dent Res
Linkwww.ncbi.nlm.nih.gov/pubmed/25672891
StudyA Genome-wide Association Study of Periodontitis in a Japanese Population.
Disease/TraitPeriodontitis
Initial sample1,593 Japanese ancestry cases, 7,980 Japanese ancestry controls
Replication sample1,167 Japanese ancestry cases, 7,178 Japanese ancestry controls
Region7p14.1
Chromosome idchr7
Chromosome position37706967
Reported geneGPR141, NME8
Mapped geneGPR141
Upstream gene id
Downstream gene id
SNP gene ids353345
Upstream gene distance
Downstream gene distance
SNP risk allelers2392510-T
SNPsrs2392510
Merged0
SNP id current2392510
Contextintron_variant
Intergenic0
Allele frequency0.59
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.15
%95 Ci[1.09-1.22]
PlatformIllumina [597434]
CNVN
Mapped traitperiodontitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000649
Study accessionGCST002781