SNP Detail For rs2390582
1.Mapping Information
Human SNP ID rs2390582
Human chromosome chr1
Human SNP position 90478350
Pig chromosome chr4
Pig SNP position 138126722
2.Annotation Information
PubMed ID17903303
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903303
StudyGenome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI__s Framingham Heart Study.
Disease/TraitCoronary artery calcification
Initial sampleUp to 678 individuals
Replication sampleNA
Region1p22.2
Chromosome idchr1
Chromosome position90478350
Reported geneintergenic
Mapped geneLOC105378851
Upstream gene id
Downstream gene id
SNP gene ids105378851
Upstream gene distance
Downstream gene distance
SNP risk allelers2390582-?
SNPsrs2390582
Merged0
SNP id current2390582
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST000097