SNP Detail For rs2378870
1.Mapping Information
Human SNP ID rs2378870
Human chromosome chr17
Human SNP position 61561262
Pig chromosome chr12
Pig SNP position 38188795
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region17q23.2
Chromosome idchr17
Chromosome position61561262
Reported geneNACA2
Mapped geneTBX4 - NACA2
Upstream gene id9496
Downstream gene id342538
SNP gene ids
Upstream gene distance76152
Downstream gene distance29171
SNP risk allelers2378870-T
SNPsrs2378870
Merged0
SNP id current2378870
Contextintergenic_variant
Intergenic1
Allele frequency0.372
P value0.0000000004
Pvalue mlog9.39794000867203
P value text
Or beta0.02
%95 Ci[0.014-0.026] unit increase
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647