SNP Detail For rs237238
1.Mapping Information
Human SNP ID rs237238
Human chromosome chr7
Human SNP position 75582098
Pig chromosome chr3
Pig SNP position 10241931
2.Annotation Information
PubMed ID21529783
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21529783
StudyA quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.
Disease/TraitAlcoholism (12-month weekly alcohol consumption)
Initial sample2,062 European ancestry alcohol dependence cases, 6,692 European ancestry controls
Replication sample3,393 European ancestry individuals
Region7q11.23
Chromosome idchr7
Chromosome position75582098
Reported geneHIP1
Mapped geneHIP1
Upstream gene id
Downstream gene id
SNP gene ids3092
Upstream gene distance
Downstream gene distance
SNP risk allelers237238-A
SNPsrs237238
Merged0
SNP id current237238
Contextsynonymous_variant
Intergenic0
Allele frequency0.07
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.156
%95 Ci[NR] unit increase
PlatformIllumina [~ 300000]
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001055