SNP Detail For rs2371030
1.Mapping Information
Human SNP ID rs2371030
Human chromosome chr2
Human SNP position 210704998
Pig chromosome chr15
Pig SNP position 125305693
2.Annotation Information
PubMed ID23144319
JournalCarcinogenesis
Linkwww.ncbi.nlm.nih.gov/pubmed/23144319
StudyPrognostic implications of genetic variants in advanced non-small cell lung cancer: a genome-wide association study.
Disease/TraitNon-small cell lung cancer
Initial sample348 Korean ancestry cases
Replication sampleNA
Region2q34
Chromosome idchr2
Chromosome position210704998
Reported geneCPS1
Mapped geneCPS1 - RPS27P10
Upstream gene id1373
Downstream gene id646233
SNP gene ids
Upstream gene distance25891
Downstream gene distance593880
SNP risk allelers2371030-G
SNPsrs2371030
Merged0
SNP id current2371030
Contextintergenic_variant
Intergenic1
Allele frequency0.091
P value0.000003
Pvalue mlog5.52287874528033
P value text(Additive model)
Or beta
%95 Ci
PlatformAffymetrix [271817]
CNVN
Mapped traitnon-small cell lung carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003060
Study accessionGCST001734