Human SNP ID | rs2371030 |
---|---|
Human chromosome | chr2 |
Human SNP position | 210704998 |
Pig chromosome | chr15 |
Pig SNP position | 125305693 |
PubMed ID | 23144319 |
---|---|
Journal | Carcinogenesis |
Link | www.ncbi.nlm.nih.gov/pubmed/23144319 |
Study | Prognostic implications of genetic variants in advanced non-small cell lung cancer: a genome-wide association study. |
Disease/Trait | Non-small cell lung cancer |
Initial sample | 348 Korean ancestry cases |
Replication sample | NA |
Region | 2q34 |
Chromosome id | chr2 |
Chromosome position | 210704998 |
Reported gene | CPS1 |
Mapped gene | CPS1 - RPS27P10 |
Upstream gene id | 1373 |
Downstream gene id | 646233 |
SNP gene ids | |
Upstream gene distance | 25891 |
Downstream gene distance | 593880 |
SNP risk allele | rs2371030-G |
SNPs | rs2371030 |
Merged | 0 |
SNP id current | 2371030 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.091 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Additive model) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [271817] |
CNV | N |
Mapped trait | non-small cell lung carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003060 |
Study accession | GCST001734 |