SNP Detail For rs236114
1.Mapping Information
Human SNP ID rs236114
Human chromosome chr20
Human SNP position 5954739
Pig chromosome chr17
Pig SNP position 15905288
2.Annotation Information
PubMed ID19448619
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19448619
StudyLoci at chromosomes 13, 19 and 20 influence age at natural menopause.
Disease/TraitMenopause (age at onset)
Initial sample2,979 European ancestry female individuals
Replication sample2,560 European ancestry female individuals
Region20p12.3
Chromosome idchr20
Chromosome position5954739
Reported geneMCM8
Mapped geneMCM8
Upstream gene id
Downstream gene id
SNP gene ids84515
Upstream gene distance
Downstream gene distance
SNP risk allelers236114-A
SNPsrs236114
Merged0
SNP id current236114
Contextintron_variant
Intergenic0
Allele frequency0.21
P value0.0000000001
Pvalue mlog10
P value text
Or beta0.5
%95 Ci[0.34-0.65] years increase
PlatformIllumina [315418]
CNVN
Mapped traitage at menopause
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004704
Study accessionGCST000401