SNP Detail For rs2348114
1.Mapping Information
Human SNP ID rs2348114
Human chromosome chr2
Human SNP position 200717470
Pig chromosome chr15
Pig SNP position 115541082
2.Annotation Information
PubMed ID22449649
JournalJ Am Acad Child Adolesc Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22449649
StudyGenome-wide association study of intelligence: additive effects of novel brain expressed genes.
Disease/TraitIntelligence
Initial sample656 European ancestry individuals from ADHD families
Replication sampleNA
Region2q33.1
Chromosome idchr2;2;2;2
Chromosome position200706420;200716231;200717470;200711561
Reported geneAOX1
Mapped geneAOX2P; AOX2P; LOC100507140; AOX2P; LOC100507140; AOX2P
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers2540051-?; rs7589014-?; rs2348114-?; rs7563911-?
SNPsrs2540051; rs7589014; rs2348114; rs7563911
Merged0
SNP id current
Contextsplice_donor_variant; intron_variant; non_coding_transcript_exon_variant; intron_variant
Intergenic
Allele frequencyNR
P value0.00000006
Pvalue mlog7.22184874961635
P value text(Amyotrophic Lateral Sclerosis)
Or beta
%95 Ci
PlatformIllumina [795637]
CNVN
Mapped traitintelligence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004337
Study accessionGCST001428