Human SNP ID | rs2326458 |
---|---|
Human chromosome | chr16 |
Human SNP position | 84954073 |
Pig chromosome | chr6 |
Pig SNP position | 4319713 |
PubMed ID | 18391951 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18391951 |
Study | Many sequence variants affecting diversity of adult human height. |
Disease/Trait | Height |
Initial sample | 30,968 European ancestry individuals |
Replication sample | 8,541 European ancestry individuals |
Region | 16q24.1 |
Chromosome id | chr16 |
Chromosome position | 84954073 |
Reported gene | ZDHHC7, CRISPLD2, USP10 |
Mapped gene | LOC105371379 - ZDHHC7 |
Upstream gene id | 105371379 |
Downstream gene id | 55625 |
SNP gene ids | |
Upstream gene distance | 11017 |
Downstream gene distance | 20387 |
SNP risk allele | rs2326458-C |
SNPs | rs2326458 |
Merged | 0 |
SNP id current | 2326458 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.26 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 5.1 |
%95 Ci | [3.14-7.06] % s.d. increase |
Platform | Affymetrix, Illumina [up to 304226] |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000175 |
PubMed ID | 25282103 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25282103 |
Study | Defining the role of common variation in the genomic and biological architecture of adult human height. |
Disease/Trait | Height |
Initial sample | 253,288 European ancestry individuals |
Replication sample | 80,067 European ancestry individuals |
Region | 16q24.1 |
Chromosome id | chr16 |
Chromosome position | 84954073 |
Reported gene | ZDHHC7 |
Mapped gene | LOC105371379 - ZDHHC7 |
Upstream gene id | 105371379 |
Downstream gene id | 55625 |
SNP gene ids | |
Upstream gene distance | 11017 |
Downstream gene distance | 20387 |
SNP risk allele | rs2326458-A |
SNPs | rs2326458 |
Merged | 0 |
SNP id current | 2326458 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.751 |
P value | 0.0000000005 |
Pvalue mlog | 9.30102999566398 |
P value text | |
Or beta | 0.022 |
%95 Ci | [0.014-0.03] unit decrease |
Platform | Affymetrix, Illumina, Perlegen [2550858] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST002647 |