Human SNP ID | rs2326017 |
---|---|
Human chromosome | chr17 |
Human SNP position | 48643203 |
Pig chromosome | chr12 |
Pig SNP position | 24826418 |
PubMed ID | 19734545 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19734545 |
Study | A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB. |
Disease/Trait | Cognitive performance |
Initial sample | Up to 1,295 individuals |
Replication sample | NA |
Region | 17q21.32 |
Chromosome id | chr17 |
Chromosome position | 48643203 |
Reported gene | AC103702.3 |
Mapped gene | LOC105371809, LOC101060400 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105371809, 101060400 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2326017-? |
SNPs | rs2326017 |
Merged | 0 |
SNP id current | 2326017 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.2985 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (SWM strategy) |
Or beta | |
%95 Ci | |
Platform | Illumina [475971] |
CNV | N |
Mapped trait | neuropsychological test |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003926 |
Study accession | GCST000477 |
PubMed ID | 23517042 |
Journal | Clin Exp Allergy |
Link | www.ncbi.nlm.nih.gov/pubmed/23517042 |
Study | Genome-wide association study of body mass index in 23 000 individuals with and without asthma. |
Disease/Trait | Body mass index in non-asthmatics |
Initial sample | 6,025 European ancestry children, 567 children, 6,334 European ancestry adult individuals, 2,050 adult individuals |
Replication sample | NA |
Region | 17q21.32 |
Chromosome id | chr17 |
Chromosome position | 48643203 |
Reported gene | intergenic |
Mapped gene | LOC105371809, LOC101060400 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105371809, 101060400 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2326017-T |
SNPs | rs2326017 |
Merged | 0 |
SNP id current | 2326017 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.28 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Children) |
Or beta | |
%95 Ci | |
Platform | Illumina [up to 527642] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001935 |