Human SNP ID | rs231770 |
---|---|
Human chromosome | chr2 |
Human SNP position | 203864430 |
Pig chromosome | chr15 |
Pig SNP position | 118624619 |
PubMed ID | 25643325 |
---|---|
Journal | JAMA Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/25643325 |
Study | A Genome-wide Association Study of Myasthenia Gravis. |
Disease/Trait | Myasthenia gravis |
Initial sample | 972 European ancestry cases, 1,977 European ancestry controls |
Replication sample | 423 European ancestry cases, 467 European ancestry controls |
Region | 2q33.2 |
Chromosome id | chr2 |
Chromosome position | 203864430 |
Reported gene | CTLA4 |
Mapped gene | LOC105373844 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105373844 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs231770-T |
SNPs | rs231770 |
Merged | 0 |
SNP id current | 231770 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | 0.38 |
P value | 0.00000000009 |
Pvalue mlog | 10.0457574905606 |
P value text | |
Or beta | 1.39 |
%95 Ci | [NR] |
Platform | Illumina [8114394] (imputed) |
CNV | N |
Mapped trait | Myasthenia gravis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004991 |
Study accession | GCST002838 |