Human SNP ID | rs2307394 |
---|---|
Human chromosome | chr2 |
Human SNP position | 147958859 |
Pig chromosome | chr15 |
Pig SNP position | 3801187 |
PubMed ID | 23263486 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23263486 |
Study | Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. |
Disease/Trait | Urate levels |
Initial sample | 49,825 European ancestry males, 60,522 European ancestry females |
Replication sample | Up to 32,813 European ancestry individuals |
Region | 2q23.1 |
Chromosome id | chr2 |
Chromosome position | 147958859 |
Reported gene | ACVR2A, ORC4L |
Mapped gene | ORC4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5000 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2307394-T |
SNPs | rs2307394 |
Merged | 0 |
SNP id current | 2307394 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.68 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 0.029 |
%95 Ci | [0.019-0.039] mg/dl decrease |
Platform | Affymetrix, Illumina, Perlegen [2450547] (imputed) |
CNV | N |
Mapped trait | urate measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531 |
Study accession | GCST001791 |