SNP Detail For rs2307394
1.Mapping Information
Human SNP ID rs2307394
Human chromosome chr2
Human SNP position 147958859
Pig chromosome chr15
Pig SNP position 3801187
2.Annotation Information
PubMed ID23263486
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23263486
StudyGenome-wide association analyses identify 18 new loci associated with serum urate concentrations.
Disease/TraitUrate levels
Initial sample49,825 European ancestry males, 60,522 European ancestry females
Replication sampleUp to 32,813 European ancestry individuals
Region2q23.1
Chromosome idchr2
Chromosome position147958859
Reported geneACVR2A, ORC4L
Mapped geneORC4
Upstream gene id
Downstream gene id
SNP gene ids5000
Upstream gene distance
Downstream gene distance
SNP risk allelers2307394-T
SNPsrs2307394
Merged0
SNP id current2307394
Contextmissense_variant
Intergenic0
Allele frequency0.68
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta0.029
%95 Ci[0.019-0.039] mg/dl decrease
PlatformAffymetrix, Illumina, Perlegen [2450547] (imputed)
CNVN
Mapped traiturate measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531
Study accessionGCST001791