SNP Detail For rs2306786
1.Mapping Information
Human SNP ID rs2306786
Human chromosome chr15
Human SNP position 59195731
Pig chromosome chr1
Pig SNP position 124843218
2.Annotation Information
PubMed ID22916037
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22916037
StudyNovel Loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis.
Disease/TraitMetabolite levels
Initial sample6,608 European ancestry individuals
Replication sampleNA
Region15q22.2
Chromosome idchr15
Chromosome position59195731
Reported geneRNF111, MYO1E, CCNB2
Mapped geneMYO1E
Upstream gene id
Downstream gene id
SNP gene ids4643
Upstream gene distance
Downstream gene distance
SNP risk allelers2306786-?
SNPsrs2306786
Merged0
SNP id current2306786
Contextintron_variant
Intergenic0
Allele frequency0.17
P value0.0000000001
Pvalue mlog10
P value text
Or beta
%95 Ci
PlatformIllumina [~ 2000000] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST001639