SNP Detail For rs2303369
1.Mapping Information
Human SNP ID rs2303369
Human chromosome chr2
Human SNP position 27492549
Pig chromosome chr3
Pig SNP position 118791683
2.Annotation Information
PubMed ID22267201
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22267201
StudyMeta-analyses identify 13 loci associated with age at menopause and highlight DNA repair and immune pathways.
Disease/TraitMenopause (age at onset)
Initial sample38,968 European ancestry female individuals
Replication sampleUp to 14,435 European ancestry female individuals
Region2p23.3
Chromosome idchr2
Chromosome position27492549
Reported geneFNDC4
Mapped geneFNDC4
Upstream gene id
Downstream gene id
SNP gene ids64838
Upstream gene distance
Downstream gene distance
SNP risk allelers2303369-T
SNPsrs2303369
Merged0
SNP id current2303369
Contextintron_variant
Intergenic0
Allele frequency0.388
P value0.000000000002
Pvalue mlog11.698970004336
P value text
Or beta0.175
%95 Ci[0.13-0.22] years decrease
PlatformAffymetrix, Illumina [2551160] (imputed)
CNVN
Mapped traitage at menopause
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004704
Study accessionGCST001381