SNP Detail For rs2302045
1.Mapping Information
Human SNP ID rs2302045
Human chromosome chr2
Human SNP position 241081801
Pig chromosome chr15
Pig SNP position 154988002
2.Annotation Information
PubMed ID25944848
JournalJ Psychopharmacol
Linkwww.ncbi.nlm.nih.gov/pubmed/25944848
StudyGenome-wide association study identifies common variants associated with pharmacokinetics of psychotropic drugs.
Disease/TraitPharmacokinetics of antipsychotic drugs in severe mental disorder (concentration drug ratio)
Initial sampleUp to 829 European ancestry cases
Replication sampleNA
Region2q37.3
Chromosome idchr2
Chromosome position241081801
Reported geneSNED1
Mapped geneMTERF4, SNED1
Upstream gene id
Downstream gene id
SNP gene ids130916, 25992
Upstream gene distance
Downstream gene distance
SNP risk allelers2302045-T
SNPsrs2302045
Merged
SNP id current2302045
Contextsplice_region_variant
Intergenic0
Allele frequency0.067
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.4064
%95 Ci[NR] unit decrease
PlatformAffymetrix [686595]
CNVN
Mapped traitunipolar depression, schizophrenia, bipolar disorder, concentration dose ratio, response to antipsychotic drug
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0007635, http://purl.obolibrary.org/obo/GO_0097332
Study accessionGCST002888