SNP Detail For rs230014
1.Mapping Information
Human SNP ID rs230014
Human chromosome chr20
Human SNP position 51123323
Pig chromosome chr17
Pig SNP position 58974789
2.Annotation Information
PubMed ID23459443
JournalPharmacogenomics J
Linkwww.ncbi.nlm.nih.gov/pubmed/23459443
StudyDrug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval.
Disease/TraitQT interval (interaction)
Initial sample33,781 European ancestry individuals
Replication sampleNA
Region20q13.13
Chromosome idchr20
Chromosome position51123323
Reported geneRPSAP1
Mapped geneLOC105372661
Upstream gene id
Downstream gene id
SNP gene ids105372661
Upstream gene distance
Downstream gene distance
SNP risk allelers230014-A
SNPsrs230014
Merged0
SNP id current230014
Contextintergenic_variant
Intergenic0
Allele frequency0.48
P value0.000004
Pvalue mlog5.39794000867203
P value text(Sulfonylurea Hypoglycemic agents)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST001890