Human SNP ID | rs230014 |
---|---|
Human chromosome | chr20 |
Human SNP position | 51123323 |
Pig chromosome | chr17 |
Pig SNP position | 58974789 |
PubMed ID | 23459443 |
---|---|
Journal | Pharmacogenomics J |
Link | www.ncbi.nlm.nih.gov/pubmed/23459443 |
Study | Drug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval. |
Disease/Trait | QT interval (interaction) |
Initial sample | 33,781 European ancestry individuals |
Replication sample | NA |
Region | 20q13.13 |
Chromosome id | chr20 |
Chromosome position | 51123323 |
Reported gene | RPSAP1 |
Mapped gene | LOC105372661 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105372661 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs230014-A |
SNPs | rs230014 |
Merged | 0 |
SNP id current | 230014 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.48 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (Sulfonylurea Hypoglycemic agents) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST001890 |