Human SNP ID | rs2299116 |
---|---|
Human chromosome | chr7 |
Human SNP position | 28775622 |
Pig chromosome | chr18 |
Pig SNP position | 48294382 |
PubMed ID | 25436638 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25436638 |
Study | Genetic Variants Associated with Serum Thyroid Stimulating Hormone (TSH) Levels in European Americans and African Americans from the eMERGE Network. |
Disease/Trait | Serum thyroid-stimulating hormone levels |
Initial sample | 4,501 European ancestry individuals, 351 African American individuals |
Replication sample | NA |
Region | 7p15.1 |
Chromosome id | chr7 |
Chromosome position | 28775622 |
Reported gene | CREB5 |
Mapped gene | CREB5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9586 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2299116-A |
SNPs | rs2299116 |
Merged | 0 |
SNP id current | 2299116 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.17 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (AA) |
Or beta | 0.25 |
%95 Ci | [0.13-0.37] unit increase |
Platform | Illumina [up to 905285] |
CNV | N |
Mapped trait | thyroid stimulating hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004748 |
Study accession | GCST002707 |