SNP Detail For rs2297644
1.Mapping Information
Human SNP ID rs2297644
Human chromosome chr10
Human SNP position 97599982
Pig chromosome chr14
Pig SNP position 118477124
2.Annotation Information
PubMed ID22286219
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22286219
StudyGenome-wide association study identifies multiple loci influencing human serum metabolite levels.
Disease/TraitMetabolite levels
Initial sample8,330 European ancestry individuals
Replication sampleNA
Region10q24.2
Chromosome idchr10
Chromosome position97599982
Reported geneDHDPSL
Mapped geneHOGA1
Upstream gene id
Downstream gene id
SNP gene ids112817
Upstream gene distance
Downstream gene distance
SNP risk allelers2297644-?
SNPsrs2297644
Merged0
SNP id current2297644
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.000000000001
Pvalue mlog12
P value text(Gln, His)
Or beta0.15
%95 Ci[0.11-0.19] unit increase
PlatformIllumina [~ 7700000] (imputed)
CNVN
Mapped traitmetabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004725
Study accessionGCST001391