Human SNP ID | rs2297644 |
---|---|
Human chromosome | chr10 |
Human SNP position | 97599982 |
Pig chromosome | chr14 |
Pig SNP position | 118477124 |
PubMed ID | 22286219 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22286219 |
Study | Genome-wide association study identifies multiple loci influencing human serum metabolite levels. |
Disease/Trait | Metabolite levels |
Initial sample | 8,330 European ancestry individuals |
Replication sample | NA |
Region | 10q24.2 |
Chromosome id | chr10 |
Chromosome position | 97599982 |
Reported gene | DHDPSL |
Mapped gene | HOGA1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 112817 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2297644-? |
SNPs | rs2297644 |
Merged | 0 |
SNP id current | 2297644 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000000001 |
Pvalue mlog | 12 |
P value text | (Gln, His) |
Or beta | 0.15 |
%95 Ci | [0.11-0.19] unit increase |
Platform | Illumina [~ 7700000] (imputed) |
CNV | N |
Mapped trait | metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004725 |
Study accession | GCST001391 |