SNP Detail For rs2296342
1.Mapping Information
Human SNP ID rs2296342
Human chromosome chr6
Human SNP position 33659300
Pig chromosome chr7
Pig SNP position 34474474
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region6p21.31
Chromosome idchr6
Chromosome position33659300
Reported geneNR
Mapped geneITPR3
Upstream gene id
Downstream gene id
SNP gene ids3710
Upstream gene distance
Downstream gene distance
SNP risk allelers2296342-A
SNPsrs2296342
Merged
SNP id current2296342
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.05
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048