SNP Detail For rs2295888
1.Mapping Information
Human SNP ID rs2295888
Human chromosome chr20
Human SNP position 35135060
Pig chromosome chr17
Pig SNP position 43699455
2.Annotation Information
PubMed ID22703881
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22703881
StudyGenetic associations for activated partial thromboplastin time and prothrombin time, their gene expression profiles, and risk of coronary artery disease.
Disease/TraitProthrombin time
Initial sample2,583 European ancestry individuals
Replication sample986 European ancestry individuals
Region20q11.22
Chromosome idchr20
Chromosome position35135060
Reported geneMYH7B, EDEM2, TRPC4AP, PROCR
Mapped geneEDEM2
Upstream gene id
Downstream gene id
SNP gene ids55741
Upstream gene distance
Downstream gene distance
SNP risk allelers2295888-A
SNPsrs2295888
Merged0
SNP id current2295888
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000000000005
Pvalue mlog12.3010299956639
P value text
Or beta0.02
%95 Ci[0.012-0.028] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitpartial thromboplastin time
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004310
Study accessionGCST001573