Human SNP ID | rs2295888 |
---|---|
Human chromosome | chr20 |
Human SNP position | 35135060 |
Pig chromosome | chr17 |
Pig SNP position | 43699455 |
PubMed ID | 22703881 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22703881 |
Study | Genetic associations for activated partial thromboplastin time and prothrombin time, their gene expression profiles, and risk of coronary artery disease. |
Disease/Trait | Prothrombin time |
Initial sample | 2,583 European ancestry individuals |
Replication sample | 986 European ancestry individuals |
Region | 20q11.22 |
Chromosome id | chr20 |
Chromosome position | 35135060 |
Reported gene | MYH7B, EDEM2, TRPC4AP, PROCR |
Mapped gene | EDEM2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55741 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2295888-A |
SNPs | rs2295888 |
Merged | 0 |
SNP id current | 2295888 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000000005 |
Pvalue mlog | 12.3010299956639 |
P value text | |
Or beta | 0.02 |
%95 Ci | [0.012-0.028] unit decrease |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | partial thromboplastin time |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004310 |
Study accession | GCST001573 |