Human SNP ID | rs2293579 |
---|---|
Human chromosome | chr11 |
Human SNP position | 47419207 |
Pig chromosome | chr2 |
Pig SNP position | 16397403 |
PubMed ID | 23022100 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23022100 |
Study | Discovery and fine mapping of serum protein loci through transethnic meta-analysis. |
Disease/Trait | Serum albumin level |
Initial sample | Up to 53,190 European ancestry individuals, 9,380 Japanese ancestry individuals |
Replication sample | NA |
Region | 11p11.2 |
Chromosome id | chr11 |
Chromosome position | 47419207 |
Reported gene | PSMC3 |
Mapped gene | PSMC3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5702 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2293579-A |
SNPs | rs2293579 |
Merged | 0 |
SNP id current | 2293579 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.4 |
P value | 0.00000008 |
Pvalue mlog | 7.09691001300805 |
P value text | (EA) |
Or beta | 0.0093 |
%95 Ci | [0.0060-0.0126] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | serum albumin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004535 |
Study accession | GCST001699 |
PubMed ID | 23022100 |
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23022100 |
Study | Discovery and fine mapping of serum protein loci through transethnic meta-analysis. |
Disease/Trait | Serum albumin level |
Initial sample | Up to 53,190 European ancestry individuals, 9,380 Japanese ancestry individuals |
Replication sample | NA |
Region | 11p11.2 |
Chromosome id | chr11 |
Chromosome position | 47419207 |
Reported gene | PSMC3 |
Mapped gene | PSMC3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5702 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2293579-A |
SNPs | rs2293579 |
Merged | 0 |
SNP id current | 2293579 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.4 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 0.0086 |
%95 Ci | [0.0055-0.0117] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | serum albumin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004535 |
Study accession | GCST001699 |