SNP Detail For rs2292298
1.Mapping Information
Human SNP ID rs2292298
Human chromosome chr4
Human SNP position 37649533
Pig chromosome chr8
Pig SNP position 30568797
2.Annotation Information
PubMed ID23382691
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23382691
StudyLoci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
Disease/TraitIgG glycosylation
Initial sample2,247 European ancestry individuals
Replication sampleNA
Region4p14
Chromosome idchr4
Chromosome position37649533
Reported geneNR
Mapped geneRELL1
Upstream gene id
Downstream gene id
SNP gene ids768211
Upstream gene distance
Downstream gene distance
SNP risk allelers2292298-G
SNPsrs2292298
Merged0
SNP id current2292298
Contextintron_variant
Intergenic0
Allele frequency0.360936488423865
P value0.000004
Pvalue mlog5.39794000867203
P value text(IGP68)
Or beta0.1504
%95 Ci[0.086-0.215] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitserum IgG glycosylation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005193
Study accessionGCST001848