Human SNP ID | rs2289700 |
---|---|
Human chromosome | chr15 |
Human SNP position | 78932341 |
Pig chromosome | chr7 |
Pig SNP position | 53634137 |
PubMed ID | 21771265 |
---|---|
Journal | Genes Brain Behav |
Link | www.ncbi.nlm.nih.gov/pubmed/21771265 |
Study | Genome-wide association study on bipolar disorder in the Bulgarian population. |
Disease/Trait | Bipolar disorder |
Initial sample | 188 Bulgarian ancestry cases, 376 Bulgarian ancestry controls |
Replication sample | 122 Bulgarian ancestry cases, 328 Bulgarian ancestry controls |
Region | 15q25.1 |
Chromosome id | chr15 |
Chromosome position | 78932341 |
Reported gene | CTSH |
Mapped gene | CTSH |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1512 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2289700-A |
SNPs | rs2289700 |
Merged | 0 |
SNP id current | 2289700 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.07 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 2.13 |
%95 Ci | [1.53-2.95] |
Platform | Illumina [497732] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST001164 |