SNP Detail For rs2289577
1.Mapping Information
Human SNP ID rs2289577
Human chromosome chr6
Human SNP position 89930772
Pig chromosome chr1
Pig SNP position 64848824
2.Annotation Information
PubMed ID20125193
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20125193
StudyCommon genetic variation and performance on standardized cognitive tests.
Disease/TraitCognitive performance
Initial sampleUp to 813 European ancestry individuals, up to 167 East Asian ancestry individuals, up to 7 Hispanic/Latin American individuals, up to 74 South Asian ancestry individuals
Replication sampleNA
Region6q15
Chromosome idchr6
Chromosome position89930772
Reported geneBACH2
Mapped geneBACH2
Upstream gene id
Downstream gene id
SNP gene ids60468
Upstream gene distance
Downstream gene distance
SNP risk allelers2289577-?
SNPsrs2289577
Merged0
SNP id current2289577
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text(Animals)
Or beta
%95 Ci
PlatformIllumina [up to 563855]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000579