Human SNP ID | rs2288059 |
---|---|
Human chromosome | chr16 |
Human SNP position | 76136198 |
Pig chromosome | chr6 |
Pig SNP position | 11536654 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Delta-5 desaturase activity |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 16q23.1 |
Chromosome id | chr16 |
Chromosome position | 76136198 |
Reported gene | NR |
Mapped gene | LOC105371349 - RPL18P13 |
Upstream gene id | 105371349 |
Downstream gene id | 441775 |
SNP gene ids | |
Upstream gene distance | 14390 |
Downstream gene distance | 98819 |
SNP risk allele | rs2288059-T |
SNPs | rs2288059 |
Merged | |
SNP id current | 2288059 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | 0.8501 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.0908 |
%95 Ci | [0.051-0.13] unit increase |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003243 |