SNP Detail For rs2287623
1.Mapping Information
Human SNP ID rs2287623
Human chromosome chr2
Human SNP position 168973645
Pig chromosome chr15
Pig SNP position 84549555
2.Annotation Information
PubMed ID24097068
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24097068
StudyDiscovery and refinement of loci associated with lipid levels.
Disease/TraitCholesterol, total
Initial sample94,595 European ancestry individuals
Replication sample93,982 European ancestry individuals
Region2q31.1
Chromosome idchr2
Chromosome position168973645
Reported geneABCB11
Mapped geneABCB11
Upstream gene id
Downstream gene id
SNP gene ids8647
Upstream gene distance
Downstream gene distance
SNP risk allelers2287623-G
SNPsrs2287623
Merged0
SNP id current2287623
Contextintron_variant
Intergenic0
Allele frequency0.41
P value0.000000000004
Pvalue mlog11.397940008672
P value text
Or beta0.027
%95 Ci[NR] unit increase
PlatformNR [NR] (imputed)
CNVN
Mapped traittotal cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004574
Study accessionGCST002221