Human SNP ID | rs2286885 |
---|---|
Human chromosome | chr9 |
Human SNP position | 126484208 |
Pig chromosome | chr1 |
Pig SNP position | 301050917 |
PubMed ID | 24518671 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24518671 |
Study | A genome-wide association study of intra-ocular pressure suggests a novel association in the gene FAM125B in the TwinsUK cohort. |
Disease/Trait | Intraocular pressure |
Initial sample | 2,774 European ancestry individuals |
Replication sample | 22,789 European ancestry and Erasmus Rucphen individuals |
Region | 9q33.3 |
Chromosome id | chr9 |
Chromosome position | 126484208 |
Reported gene | FAM125B |
Mapped gene | MVB12B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 89853 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2286885-A |
SNPs | rs2286885 |
Merged | 0 |
SNP id current | 2286885 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.57 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.12 |
%95 Ci | [0.07-0.18] mmHg increase |
Platform | Illumina [~ 1870000] |
CNV | N |
Mapped trait | intraocular pressure measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004695 |
Study accession | GCST002356 |