SNP Detail For rs2286885
1.Mapping Information
Human SNP ID rs2286885
Human chromosome chr9
Human SNP position 126484208
Pig chromosome chr1
Pig SNP position 301050917
2.Annotation Information
PubMed ID24518671
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24518671
StudyA genome-wide association study of intra-ocular pressure suggests a novel association in the gene FAM125B in the TwinsUK cohort.
Disease/TraitIntraocular pressure
Initial sample2,774 European ancestry individuals
Replication sample22,789 European ancestry and Erasmus Rucphen individuals
Region9q33.3
Chromosome idchr9
Chromosome position126484208
Reported geneFAM125B
Mapped geneMVB12B
Upstream gene id
Downstream gene id
SNP gene ids89853
Upstream gene distance
Downstream gene distance
SNP risk allelers2286885-A
SNPsrs2286885
Merged0
SNP id current2286885
Contextintron_variant
Intergenic0
Allele frequency0.57
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.12
%95 Ci[0.07-0.18] mmHg increase
PlatformIllumina [~ 1870000]
CNVN
Mapped traitintraocular pressure measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004695
Study accessionGCST002356