SNP Detail For rs2282335
1.Mapping Information
Human SNP ID rs2282335
Human chromosome chr9
Human SNP position 69251016
Pig chromosome chr1
Pig SNP position 248879846
2.Annotation Information
PubMed ID22044751
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22044751
StudyHeritability and genome-wide association analysis of renal sinus fat accumulation in the Framingham Heart Study.
Disease/TraitRenal sinus fat
Initial sample2,809 European ancestry individuals
Replication sampleNA
Region9q21.11
Chromosome idchr9
Chromosome position69251016
Reported geneTJP2
Mapped geneTJP2
Upstream gene id
Downstream gene id
SNP gene ids9414
Upstream gene distance
Downstream gene distance
SNP risk allelers2282335-A
SNPsrs2282335
Merged0
SNP id current2282335
Contextintron_variant
Intergenic0
Allele frequency0.36
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.171
%95 Ci[0.098-0.244] unit increase
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitrenal sinus adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004864
Study accessionGCST001304