Human SNP ID | rs2281727 |
---|---|
Human chromosome | chr17 |
Human SNP position | 2214651 |
Pig chromosome | chr12 |
Pig SNP position | 50164569 |
PubMed ID | 24262325 |
---|---|
Journal | Stroke |
Link | www.ncbi.nlm.nih.gov/pubmed/24262325 |
Study | Shared genetic susceptibility to ischemic stroke and coronary artery disease: a genome-wide analysis of common variants. |
Disease/Trait | Coronary artery disease |
Initial sample | 33,398 cases, 75,726 controls |
Replication sample | NA |
Region | 17p13.3 |
Chromosome id | chr17 |
Chromosome position | 2214651 |
Reported gene | SMG6 |
Mapped gene | LOC105371487, SMG6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105371487, 23293 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2281727-G |
SNPs | rs2281727 |
Merged | 0 |
SNP id current | 2281727 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 1.07 |
%95 Ci | [1.04-1.10] |
Platform | Illumina [575000] (imputed) |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST002289 |