SNP Detail For rs2281727
1.Mapping Information
Human SNP ID rs2281727
Human chromosome chr17
Human SNP position 2214651
Pig chromosome chr12
Pig SNP position 50164569
2.Annotation Information
PubMed ID24262325
JournalStroke
Linkwww.ncbi.nlm.nih.gov/pubmed/24262325
StudyShared genetic susceptibility to ischemic stroke and coronary artery disease: a genome-wide analysis of common variants.
Disease/TraitCoronary artery disease
Initial sample33,398 cases, 75,726 controls
Replication sampleNA
Region17p13.3
Chromosome idchr17
Chromosome position2214651
Reported geneSMG6
Mapped geneLOC105371487, SMG6
Upstream gene id
Downstream gene id
SNP gene ids105371487, 23293
Upstream gene distance
Downstream gene distance
SNP risk allelers2281727-G
SNPsrs2281727
Merged0
SNP id current2281727
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text
Or beta1.07
%95 Ci[1.04-1.10]
PlatformIllumina [575000] (imputed)
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST002289