SNP Detail For rs2281636
1.Mapping Information
Human SNP ID rs2281636
Human chromosome chr10
Human SNP position 99732646
Pig chromosome chr14
Pig SNP position 120341603
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region10q24.2
Chromosome idchr10
Chromosome position99732646
Reported geneCOX15, CUTC
Mapped geneCOX15, CUTC
Upstream gene id
Downstream gene id
SNP gene ids1355, 51076
Upstream gene distance
Downstream gene distance
SNP risk allelers2281636-A
SNPsrs2281636
Merged0
SNP id current2281636
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.336
P value0.000006
Pvalue mlog5.22184874961635
P value text(LDL )
Or beta0.03
%95 Ci[NR] mg/dL increase
PlatformIllumina [899892]
CNVN
Mapped traitlow density lipoprotein cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004611
Study accessionGCST001762