Human SNP ID | rs2281388 |
---|---|
Human chromosome | chr6 |
Human SNP position | 33092341 |
Pig chromosome | chr7 |
Pig SNP position | 29040108 |
PubMed ID | 21841780 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21841780 |
Study | A genome-wide association study identifies two new risk loci for Graves__ disease. |
Disease/Trait | Graves__ disease |
Initial sample | 1,468 Chinese ancestry cases, 1,490 Chinese ancestry controls |
Replication sample | 3,994 Chinese ancestry cases, 3,510 Chinese ancestry controls |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 33092341 |
Reported gene | HLA, DPB1 |
Mapped gene | HLA-DPB1 - HLA-DPB2 |
Upstream gene id | 3115 |
Downstream gene id | 3116 |
SNP gene ids | |
Upstream gene distance | 2645 |
Downstream gene distance | 20175 |
SNP risk allele | rs2281388-T |
SNPs | rs2281388 |
Merged | 0 |
SNP id current | 2281388 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | 0.32 |
P value | 2E-65 |
Pvalue mlog | 64.698970004336 |
P value text | |
Or beta | 1.64 |
%95 Ci | [1.55-1.74] |
Platform | Illumina [486049] |
CNV | N |
Mapped trait | Graves disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004237 |
Study accession | GCST001200 |