SNP Detail For rs2281388
1.Mapping Information
Human SNP ID rs2281388
Human chromosome chr6
Human SNP position 33092341
Pig chromosome chr7
Pig SNP position 29040108
2.Annotation Information
PubMed ID21841780
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21841780
StudyA genome-wide association study identifies two new risk loci for Graves__ disease.
Disease/TraitGraves__ disease
Initial sample1,468 Chinese ancestry cases, 1,490 Chinese ancestry controls
Replication sample3,994 Chinese ancestry cases, 3,510 Chinese ancestry controls
Region6p21.32
Chromosome idchr6
Chromosome position33092341
Reported geneHLA, DPB1
Mapped geneHLA-DPB1 - HLA-DPB2
Upstream gene id3115
Downstream gene id3116
SNP gene ids
Upstream gene distance2645
Downstream gene distance20175
SNP risk allelers2281388-T
SNPsrs2281388
Merged0
SNP id current2281388
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency0.32
P value2E-65
Pvalue mlog64.698970004336
P value text
Or beta1.64
%95 Ci[1.55-1.74]
PlatformIllumina [486049]
CNVN
Mapped traitGraves disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004237
Study accessionGCST001200