Human SNP ID | rs2280630 |
---|---|
Human chromosome | chr3 |
Human SNP position | 39154473 |
Pig chromosome | chr13 |
Pig SNP position | 26106334 |
PubMed ID | 25648963 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25648963 |
Study | Genome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium. |
Disease/Trait | Verbal declarative memory |
Initial sample | Up to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals |
Replication sample | Up to 10,617 European ancestry individuals, up to 3,811 African American individuals |
Region | 3p22.2 |
Chromosome id | chr3 |
Chromosome position | 39154473 |
Reported gene | AXUD1, TTC21A |
Mapped gene | LOC101928263, CSRNP1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928263, 64651 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2280630-T |
SNPs | rs2280630 |
Merged | 0 |
SNP id current | 2280630 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.32 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (PAR-dr, EA) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | memory performance, paragraph delayed recall measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004874, http://www.ebi.ac.uk/efo/EFO_0006806 |
Study accession | GCST002701 |
PubMed ID | 25648963 |
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25648963 |
Study | Genome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium. |
Disease/Trait | Verbal declarative memory |
Initial sample | Up to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals |
Replication sample | Up to 10,617 European ancestry individuals, up to 3,811 African American individuals |
Region | 3p22.2 |
Chromosome id | chr3 |
Chromosome position | 39154473 |
Reported gene | AXUD1, TTC21A |
Mapped gene | LOC101928263, CSRNP1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928263, 64651 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2280630-T |
SNPs | rs2280630 |
Merged | 0 |
SNP id current | 2280630 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.32 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (PAR-dr) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | memory performance, paragraph delayed recall measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004874, http://www.ebi.ac.uk/efo/EFO_0006806 |
Study accession | GCST002701 |