Human SNP ID | rs2278702 |
---|---|
Human chromosome | chr15 |
Human SNP position | 80402580 |
Pig chromosome | chr7 |
Pig SNP position | 54766702 |
PubMed ID | 18711365 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18711365 |
Study | Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder. |
Disease/Trait | Bipolar disorder |
Initial sample | 4,387 European ancestry cases, 6,209 European ancestry controls |
Replication sample | NA |
Region | 15q25.1 |
Chromosome id | chr15 |
Chromosome position | 80402580 |
Reported gene | NR |
Mapped gene | LOC101929560 - ARNT2 |
Upstream gene id | 101929560 |
Downstream gene id | 9915 |
SNP gene ids | |
Upstream gene distance | 40116 |
Downstream gene distance | 1770 |
SNP risk allele | rs2278702-? |
SNPs | rs2278702 |
Merged | 0 |
SNP id current | 2278702 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.83 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.21 |
%95 Ci | [NR] |
Platform | Affymetrix [1769948] (imputed) |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST000220 |